BEAST is a cross-platform program for Bayesian analysis of molecular sequences using MCMC. It is entirely orientated towards rooted, time-measured phylogenies inferred using strict or relaxed …

Running BEAST for the first time This tutorial will guide you through running BEAST and some of its accessory programs to do a simple phylogenetic analysis. If you haven’t already, download and …

BEAST is a cross-platform program for Bayesian analysis of molecular sequences using MCMC. It is entirely orientated towards rooted, time-measured phylogenies inferred using strict or relaxed …

FigTree is a program for viewing trees, including summary information produced by TreeAnnotator, and producing publication quality figures.

Tracer (now at version 1.7.2) is a software package for visualising and analysing the MCMC trace files generated through Bayesian phylogenetic inference. Tracer provides kernel density estimation, …

2024年7月9日 · BEAST X is the new name for BEAST v1 project and the first release version of this is v10.5.0 which supersedes v1.10.4 in the old version system. From now on we will use the full major, …

Installing BEAST BEAST has been developed in Java, which allows the same code to run on any platform that has the Java software installed. We have also created packages for each of the …

BEAUti & The BEAST and other programs Software packages in the BEAST family. Programs distributed as part of the core BEAST package These programs are distributed independently but are …

2018年11月14日 · BEAST v1.10.4 fixes a bug when trying to specify a burnin on the command line version of LogCombiner. It also introduces two new command line options specific to BEAGLE v3.1 ( …

To inform BEAUti/BEAST about the sampling dates of the sequences, go to the Tips menu and select the “Use tip dates” option. By default all the taxa are assumed to have a date of zero (i.e. the …